{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:18"], "contactPoint": {"fn": "Main, Dorrie", "hasEmail": "mailto:dorrie@wsu.edu"}, "description": "<p>The CottonGen CottonCyc Pathways Database, part of CottonGen, supports searching and browsing the following CottonCyc databases:</p>\n<ul>\n<li>Cyc pathways for JGI v2.0 <em>G. raimondii</em> D5 genome assembly</li>\n</ul>\n<p>This Cyc database was constructed using PathwayTools version 20.0 using the gene models from the JGI v2.0 D5 genome assembly of <em>Gossypium raimondii</em>. There has been no manual curation of this Cyc database. Pathway predictions were made using PathwayTools and in-silico v2.1 annotations as provided by JGI.</p>\n<ul>\n<li>Cyc pathways for CGP-BGI v1.0 <em>G. hirsutum</em> AD1 genome assembly</li>\n</ul>\n<p>This Cyc database was constructed using PathwayTools version 20.0 using the gene models from the CGP-BGI v1.0 AD1 genome assembly of <em>Gossypium hirsutum</em>. There has been no manual curation of this Cyc database. Pathway predictions were made using PathwayTools and in-silico v1.0 annotations as provided by CGP-BGI.</p>\n<p>Search parameters include genes, proteins, RNAs, compounds, reactions, pathways, growth media, and BLAST search.  </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Website Pointer to CottonGen CottonCyc Pathways Database.</p> <p>File Name: Web Page, url: <a href=\"http://ptools.cottongen.org/\">http://ptools.cottongen.org/</a> </p></li></ul><p></p>", "distribution": [{"@type": "dcat:Distribution", "downloadURL": "http://ptools.cottongen.org/", "mediaType": "text/html", "title": "http://ptools.cottongen.org/"}], "identifier": "10113/AA22863", "keyword": ["CottonGen", "CottonDB", "Cotton Marker Database", "Tripal database", "GBrowse", "CMap", "NCBI BLAST", "NP301", "Online database", "data.gov", "ARS"], "license": "https://www.usa.gov/publicdomain/label/1.0/", "modified": "2023-12-18", "programCode": ["005:040"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "title": "CottonGen CottonCyc Pathways Database"}