{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:18"], "contactPoint": {"fn": "Main, Dorrie", "hasEmail": "mailto:dorrie@wsu.edu"}, "description": "<p>CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from <em>Gossypium</em> species. This can be done using nucleotide sequences or peptide sequences. BLAST functionality is similar to that on NCBI.</p>\n<p>BLAST Programs:</p>\n<ul>\n<li>blastn: Search a nucleotide database using a nucleotide query.</li>\n<li>blastx: Search protein database using a translated nucleotide query.</li>\n<li>tblastn: Search translated nucleotide database using a protein query.</li>\n<li>\n<p>blastp: Search protein database using a protein query.</p>\n<div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Website Pointer for CottonGen BLAST Search.</p> <p>File Name: Web Page, url: <a href=\"https://www.cottongen.org/blast\" target=\"_blank\">https://www.cottongen.org/blast</a> </p><p>CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from *Gossypium* species. This can be done using nucleotide sequences or peptide sequences. BLAST functionality is similar to that on NCBI. Enter or upload FASTA sequence(s) to query and select BLAST database.\n</p></li>\n</ul>\n<p>BLAST Programs:</p>\n<ul>\n<li>blastn: Search a nucleotide database using a nucleotide query.</li>\n<li>blastx: Search protein database using a translated nucleotide query.</li>\n<li>tblastn: Search translated nucleotide database using a protein query.</li>\n<li>blastp: Search protein database using a protein query.</li></ul><p></p></li>\n</ul>", "distribution": [{"@type": "dcat:Distribution", "downloadURL": "https://www.cottongen.org/blast", "mediaType": "text/html", "title": "https://www.cottongen.org/blast"}], "identifier": "10113/AA23030", "keyword": ["CottonGen", "NCBI BLAST", "NP301", "Online database", "data.gov", "ARS"], "license": "https://www.usa.gov/publicdomain/label/1.0/", "modified": "2024-02-13", "programCode": ["005:040"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "title": "CottonGen BLAST"}