80 datasets found
-
Federal
CottonGen CottonCyc Pathways Database
Department of Agriculture —
The CottonGen CottonCyc Pathways Database, part of CottonGen, supports searching and browsing the following CottonCyc databases: Cyc pathways for JGI v2.0 G.... -
Federal
Switchgrass ESTs and SNPs
Department of Agriculture —
As part of our project, “Developing Association Mapping in Polyploid Perennial Biofuel Grasses” (DOE-USDA Plant Feedstock Genomics for Bioenergy Program grant... -
Federal
CottonGen Breeding Information Management System (BIMS)
Department of Agriculture —
BIMS, the Breeding Information Management System, is a secure and comprehensive online breeding management system developed for the generic Tripal Database Platform... -
Federal
Data from: Data for the calculation of an indicator of the comprehensiveness of conservation of useful wild plants
Department of Agriculture —
The datasets and code presented in this Data in Brief article are related to the research article entitled "Comprehensiveness of conservation of useful wild plants:... -
Federal
National Invertebrate Genetic Resources
Department of Agriculture —
Insects impact American agriculture both as destructive and beneficial organisms. Insect pests, parasites, predators, products, and pollinators are all economically... -
Federal
Data from: Genetic Diversity and Population Structure of the USDA Sweetpotato (Ipomoea batatas) Germplasm Collections Using GBSpoly
Department of Agriculture —
Sweetpotato (Ipomoea batatas) plays a critical role in food security and is the most important root crop worldwide following potatoes and cassava. In the United... -
Federal
Metadata from: Breeding heat tolerant orchardgrass germplasm for summer persistence in high temperature stress environments of the southeastern United States
Department of Agriculture —
This is digital research data corresponding to a published manuscript, Breeding heat tolerant orchardgrass germplasm for summer persistence in high temperature stress... -
Federal
Data from: Association mapping of resistance to tan spot in the Global Durum Panel
Department of Agriculture —
Phenotypic data: A total of 510 lines from the global durum panel (GDP) were evaluated for reaction to five isolates of the fungal pathogen Pyrenophora tritici-... -
Federal
Data from: First Report of Squash vein yellowing virus in Watermelon in Guatemala
Department of Agriculture —
Watermelon (Citrullus lanatus) and other cucurbits are important crops grown in Guatemala for local consumption and export. The whitefly (Bemisia tabaci) vector of... -
Federal
Data from: Chromosome-scale Genome Assembly of Lewis Flax (Linum lewisii Pursh.)
Department of Agriculture —
Within this dataset: Genome assembly of Linum lewisii (NDSU_LiLewi_1.0.fasta) First 9 scaffolds represent all 9 chromosomes (e.g. Scaffold_1 is Chromosome 1,... -
Federal
BBGD: an Online Database for Blueberry Genomic Data
Department of Agriculture —
NOTE: This dataset is no longer publicly available. BBGD (http://bioinformatics.towson.edu/BBGD/) was developed as a database for blueberry genomics. BBGD is both a... -
Federal
Data from: A scalable, low-cost phenotyping strategy to assess tuber size, shape, and the colorimetric features of tuber skin and flesh in potato breeding populations
Department of Agriculture —
This data set contains images of potato tubers from clones in the A08241 F1 breeding population grown in Aberdeen, Idaho during the 2019 field season. Each clone was... -
Federal
Data from: Genome-wide association mapping of resistance to the foliar diseases septoria nodorum blotch and tan spot in a global winter wheat collection
Department of Agriculture —
Phenotypic Data A subset of 264 lines from the National Small Grains Collection global hexaploid winter wheat germplasm collection was evaluated under controlled... -
Federal
Data from: Genetic diversity, population structure, and selection of core germplasm sets from the USDA sweetpotato (Ipomoea batatas) collection
Department of Agriculture —
R scripts and associated data used to select the sweetpotato core sets described in: Slonecki, T. J., Rutter, W. B., Olukolu, B. A., Yencho, G. C., Jackson, D. M.,... -
Federal
Data from: Cover cropping history affects cotton boll distribution, lint yields, and fiber quality
Department of Agriculture —
This is digital research data corresponding to a published manuscript, Cover cropping history affects cotton boll distribution, lint yields, and fiber quality, in... -
Federal
IMAP: Image Mapping & Analytics for Phenotyping
Department of Agriculture —
A set of PYTHON programs to implement image processing of ground and aerial images by offering via graphical user interface (GUI) 1) plot-level metrics extraction... -
Federal
Data from: Identification of robust yield QTL derived from cultivated emmer for durum wheat improvement
Department of Agriculture —
Phenotypic Data Two durum × cultivated emmer recombinant inbred line (RIL) populations were evaluated for grain yield components under field conditions in North... -
Federal
Data from: Heritable differences in abundance of bacterial rhizosphere taxa are correlated with fungal necrotrophic pathogen resistance
Department of Agriculture —
This Ag Data Commons submission includes the 94 sunflower paired-end sequencing FASTQ files, the corresponding 16S bacterial FASTQ files, and other relevant data to... -
Federal
Data from: Dataset of de novo assembly and functional annotation of the transcriptome of blueberry (Vaccinium spp.)
Department of Agriculture —
Blueberry is an economically important berry crop. Both production and consumption of blueberries have increased sharply worldwide in recent years at least partly due...
80 datasets found