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Federal
Datasets to develop and validate the genus-level, trait-based multimetric diatom indices for assessing the ecological condition of river and stream across the conterminous United States
U.S. Environmental Protection Agency —
Data is from National Aquatic Resource Surveys. This dataset is associated with the following publication: Riato, L., R. Hill, A. Herlihy, D. Peck, P. Kaufmann, J.... -
Federal
Harmonization of sediment diatoms from hundreds of lakes in the northeastern United States
U.S. Environmental Protection Agency —
Sediment diatoms are widely used to track environmental histories of lakes and their watersheds, but merging datasets generated by different researchers for further... -
Federal
Diatom and Environmental Data
U.S. Environmental Protection Agency —
Raw data associated with this research. This dataset is associated with the following publication: Yuan, L., R. Mitchell, E. Pilgrim, and N. Smucker. Inferences based... -
Federal
LMR_spatial_temporal_analysis_data
U.S. Environmental Protection Agency —
This file includes the following data for 25 stream sites in the Little Miami River watershed: diatom operational taxonomic units with their numbers and relative... -
Federal
Hamilton et al. 2023 A voucher flora of diatoms from fens in the Tanana River floodplain, Alaska
U.S. Environmental Protection Agency —
Supporting information for Hamilton et al. 2023, File S1: taxonomic authority references; Table S1: species information. This dataset is associated with the following... -
Federal
Supplementary material for Lee et al. 2019 Taxonomic harmonization may reveal a stronger association between diatom assemblages and total phosphorus in large datasets
U.S. Environmental Protection Agency —
Diatom data have been collected in large-scale biological assessments in the United States, such as the U.S. Environmental Protection Agency’s National Rivers and... -
Federal
Diatom DNA sequence data
U.S. Environmental Protection Agency —
The raw data consisted of demultiplexed fastq files pairs (R1.fastq and R2.fastq) per sample accessible on the NCBI Sequences Read Archive (SRA) under the BioProject... -
Federal
Foy Lake paleodiatom data
U.S. Environmental Protection Agency —
Percent abundance of 109 diatom species collected from a Foy Lake (Montana, USA) sediment core that was sampled every ∼5–20 years, yielding a ∼7 kyr record over 800... -
Federal
EPA 2018-2019 National Rivers and Streams Assessment Diatom Diversity and Phosphorus Study
U.S. Environmental Protection Agency —
Raw data associated with EPA 2018-2019 National Rivers and Streams Assessment Diatom Diversity and Phosphorus Study. This dataset is associated with the following... -
Federal
Foy Lake Abundance data
U.S. Environmental Protection Agency —
Percent abundance of 109 diatom species collected from a Foy Lake (Montana, USA) sediment core that was sampled every ∼5–20 years, yielding a ∼7 kyr record over 800... -
Federal
Supplementary material for Lee et al. in review: Harmonization and Revision of a National Diatom Dataset for Use in the Development of Water Quality Indicators
U.S. Environmental Protection Agency —
ABSTRACT Diatom data have been collected in large-scale biological assessments in the United States, such as the U.S. Environmental Protection Agency’s National... -
Federal
LMR watershed temporal DNA metabarcoding 2016 study
U.S. Environmental Protection Agency —
LMR watershed temporal DNA metabarcoding 2016 study. This dataset is associated with the following publication: Smucker, N., E. Pilgrim, H. Wu, C. Nietch, J. Darling,... -
Federal
Estimate of sediment accumulation rates and bottom core ages in northeast lakes
U.S. Environmental Protection Agency —
Supplementary data for the report in the format of an Excel spreadsheet (with data dictionary) and an Microsoft Access database file (downloaded as a zip file). The... -
Federal
Diatom and environmental data
U.S. Environmental Protection Agency —
These raw data associated with this research were collected as part of the United States Environmental Protection Agency's 2018-2019 National Rivers and Streams... -
Federal
Metadata for Carlisle et al. A Web-Based Tool for Assessing the Condition of Benthic Diatom Assemblages in Streams and Rivers of the Conterminous United States
U.S. Environmental Protection Agency —
R code and data files used to identify diatom metrics that are robust to taxonomic inconsistency. The R code run a goodness of fit analysis to determine how much...