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Try the next-generation Data Catalog at catalog-beta.data.gov and help shape it with your feedback.

31 datasets found
  • Federal

    GEO (Gene Expression Omnibus)

    U.S. Department of Health & Human Services —

    GEO (Gene Expression Omnibus) is a public functional genomics data repository supporting MIAME-compliant data submissions. There are also tools provided to help users...
  • Federal

    ClinVar

    U.S. Department of Health & Human Services —

    ClinVar aggregates information about genomic variation and its relationship to human health.
  • Federal

    Database of Short Genetic Variations (dbSNP)

    U.S. Department of Health & Human Services —

    Database of Short Genetic Variations (dbSNP) contains human single nucleotide variations, microsatellites, and small-scale insertions and deletions along with...
  • Federal

    NCBI Virus

    U.S. Department of Health & Human Services —

    NCBI Virus is an integrative, value-added resource designed to support retrieval, display and analysis of a curated collection of virus sequences and large sequence...
  • Federal

    MedGen

    U.S. Department of Health & Human Services —

    MedGen is NCBI's portal to information about conditions and phenotypes related to Medical Genetics. Terms from the NIH Genetic Testing Registry (GTR), UMLS, HPO,...
  • Federal

    Database of Genotype and Phenotype (dbGaP)

    U.S. Department of Health & Human Services —

    Database of Genotype and Phenotype (dbGaP) was developed to archive and distribute the data and results from studies that have investigated the interaction of...
  • Federal

    NCBI Datasets

    U.S. Department of Health & Human Services —

    NCBI Datasets is one-stop shop for finding, browsing, and downloading genomic data. Find and download taxonomy, genome, gene, transcript, protein data, including...
  • Federal

    OSIRIS

    U.S. Department of Health & Human Services —

    A public domain quality assurance software package that facilitates the assessment of multiplex short tandem repeat (STR) DNA profiles based on laboratory-specific...
  • Federal

    OMIM (Online Mendelian Inheritance in Man)

    U.S. Department of Health & Human Services —

    Comprehensive, authoritative, and timely compendium of human genes and genetic phenotypes.
  • Federal

    Open Reading Frame Finder (ORF Finder)

    U.S. Department of Health & Human Services —

    A graphical analysis tool that finds all open reading frames in a user's sequence or in a sequence already in the database.
  • Federal

    Transcriptome Shotgun Assembly (TSA) Sequence Database and Submissions

    U.S. Department of Health & Human Services —

    TSA is an archive of computationally assembled transcript sequences from primary data such as ESTs and Next Generation Sequencing Technologies. The overlapping...
  • Federal

    Third Party Annotation (TPA) Database

    U.S. Department of Health & Human Services —

    A database that contains sequences built from the existing primary sequence data in GenBank. The sequences and corresponding annotations are experimentally supported...
  • Federal

    BioProject

    U.S. Department of Health & Human Services —

    The BioProject database links to data that have been or will be deposited into archival databases maintained at members of the International Nucleotide Sequence...
  • Federal

    HomoloGene

    U.S. Department of Health & Human Services —

    System for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes.
  • Federal

    Genetic Testing Registry (GTR)

    U.S. Department of Health & Human Services —

    Genetic Testing Registry (GTR) is a free, centralized voluntary registry of comprehensive genetic test information covering clinical and research tests for Mendelian...
  • Federal

    Sequence Set Browser

    U.S. Department of Health & Human Services —

    This site is for browsing WGS (Whole Genome Shotgun) genomes, TSA (Transcriptome Shotgun Assemblies) and TLS (Targeted Locus Study) sets. WGS sequences are incomplete...
  • Federal

    IgBLAST

    U.S. Department of Health & Human Services —

    IgBLAST was developed at NCBI to facilitate analysis of immunoglobulin as well as T cell receptor (TR) sequences. It uses BLAST search algorithm.
  • Federal

    SPDI Variation Service

    U.S. Department of Health & Human Services —

    This genetic variation services interconvert and transform short genetic variants between HGVS expressions, VCF format, and the new SPDI (Sequence Position Deletion...
  • Federal

    GenBank

    U.S. Department of Health & Human Services —

    NIH Genetic sequence database; an annotated collection of all publicly available DNA sequences.
  • Federal

    Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses

    U.S. Department of Health & Human Services —

    Background Horizontal gene transfer (HGT) played an important role in shaping microbial genomes. In addition to genes under sporadic selection, HGT also affects...
31 datasets found

You can also access this registry using the API (see API Docs).

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